MetaLichen Lab at SciLifeLab & Stockholm University

Publications

CurrBiol2025

Browse all publications

2025

i Tangerine i : a i Starship i -like element in the genomes of i Xanthoria i lichen-forming fungi
Tangerine : a Starship -like element in the genomes of Xanthoria lichen-forming fungi
Gulnara Tagirdzhanova, Angus Bucknell, Ellen S. Cameron, Robert D. Finn, Mark Blaxter, Megan C. McDonald, Nicholas J. Talbot
Cold Spring Harbor Laboratory  ·  27 Nov 2025  ·  doi:10.1101/2025.11.25.690456
Chromosome level genome assembly of the photobiont microalga i Trebouxia i sp. scp A48 scp from the lichen i Xanthoria parietina i
Chromosome‐level genome assembly of the photobiont microalga Trebouxia sp. ‘ A48 ’ from the lichen Xanthoria parietina
Gulnara Tagirdzhanova, Jasper Raistrick, Nicholas J. Talbot
New Phytologist  ·  10 Nov 2025  ·  doi:10.1111/nph.70728
This paper was featured in Plant Science Research Weekly in Plantae
Complexity of the lichen symbiosis revealed by metagenome and transcriptome analysis of Xanthoria parietina
Complexity of the lichen symbiosis revealed by metagenome and transcriptome analysis of Xanthoria parietina
Gulnara Tagirdzhanova, Klara Scharnagl, Neha Sahu, Xia Yan, Angus Bucknell, …, Sandra Lorena Ament-Velásquez, Ioana Onuț-Brännström, Hanna Johannesson, Dan MacLean, Nicholas J. Talbot
Current Biology  ·  01 Feb 2025  ·  doi:10.1016/j.cub.2024.12.041
This paper was featured on the cover, in a commentary by Chrismas & Yahr, as well as was highlighted in Science
Massive Gene Loss in the Fungus i Sporothrix epigloea i Accompanied a Shift to Life in a Glucuronoxylomannan-based Gel Matrix
Massive Gene Loss in the Fungus Sporothrix epigloea Accompanied a Shift to Life in a Glucuronoxylomannan-based Gel Matrix
Carmen C G Allen, David Díaz-Escandón, Sarah DeLong-Duhon, Gulnara Tagirdzhanova, Alejandro Huereca, Shauna Reckseidler-Zenteno, Andrew Forbes, Toby Spribille
Genome Biology and Evolution  ·  27 Jan 2025  ·  doi:10.1093/gbe/evaf015

2024

Microbial occurrence and symbiont detection in a global sample of lichen metagenomes
Microbial occurrence and symbiont detection in a global sample of lichen metagenomes
Gulnara Tagirdzhanova, Paul Saary, Ellen S. Cameron, Carmen C. G. Allen, Arkadiy I. Garber, …, Håkon Holien, Tor Tønsberg, Lisa Y. Stein, Robert D. Finn, Toby Spribille
PLOS Biology  ·  07 Nov 2024  ·  doi:10.1371/journal.pbio.3002862

2023

Genomic analysis of Coccomyxa viridis, a common low-abundance alga associated with lichen symbioses
Genomic analysis of Coccomyxa viridis, a common low-abundance alga associated with lichen symbioses
Gulnara Tagirdzhanova, Klara Scharnagl, Xia Yan, Nicholas J. Talbot
Scientific Reports  ·  02 Dec 2023  ·  doi:10.1038/s41598-023-48637-w
The coming golden age for lichen biology
The coming golden age for lichen biology
Klara Scharnagl, Gulnara Tagirdzhanova, Nicholas J. Talbot
Current Biology  ·  01 Jun 2023  ·  doi:10.1016/j.cub.2023.03.054.
Essay on the open questions in lichen biology

2022

Genome-level analyses resolve an ancient lineage of symbiotic ascomycetes
Genome-level analyses resolve an ancient lineage of symbiotic ascomycetes
David Díaz-Escandón, Gulnara Tagirdzhanova, Dan Vanderpool, Carmen C.G. Allen, André Aptroot, …, Kerry Knudsen, Jana Kocourková, Robert Lücking, Philipp Resl, Toby Spribille
Current Biology  ·  01 Dec 2022  ·  doi:10.1016/j.cub.2022.11.014
Large differences in carbohydrate degradation and transport potential among lichen fungal symbionts
Large differences in carbohydrate degradation and transport potential among lichen fungal symbionts
Philipp Resl, Adina R. Bujold, Gulnara Tagirdzhanova, Peter Meidl, Sandra Freire Rallo, …, John P. McCutcheon, Mats Wedin, Silke Werth, Lisa M. Willis, Toby Spribille
Nature Communications  ·  12 May 2022  ·  doi:10.1038/s41467-022-30218-6
Evolutionary biology of lichen symbioses
Evolutionary biology of lichen symbioses
Toby Spribille, Philipp Resl, Daniel E. Stanton, Gulnara Tagirdzhanova
New Phytologist  ·  18 Mar 2022  ·  doi:10.1111/nph.18048
This paper was featured on the cover as well as in a commentary by Kranner et al.

2021

Lichen fungi do not depend on the alga for ATP production: A comment on Pogoda et al. 2018
Lichen fungi do not depend on the alga for ATP production: A comment on Pogoda et al. (2018)
Gulnara Tagirdzhanova, John P. McCutcheon, Toby Spribille
Molecular Ecology  ·  07 Jul 2021  ·  doi:10.1111/mec.16010
Predicted Input of Uncultured Fungal Symbionts to a Lichen Symbiosis from Metagenome-Assembled Genomes
Predicted Input of Uncultured Fungal Symbionts to a Lichen Symbiosis from Metagenome-Assembled Genomes
Gulnara Tagirdzhanova, Paul Saary, Jeffrey P Tingley, David Díaz-Escandón, D Wade Abbott, Robert D Finn, Toby Spribille
Genome Biology and Evolution  ·  09 Mar 2021  ·  doi:10.1093/gbe/evab047

2020

3D biofilms: in search of the polysaccharides holding together lichen symbioses
3D biofilms: in search of the polysaccharides holding together lichen symbioses
Toby Spribille, Gulnara Tagirdzhanova, Spencer Goyette, Veera Tuovinen, Rebecca Case, Wesley F Zandberg
FEMS Microbiology Letters  ·  10 Feb 2020  ·  doi:10.1093/femsle/fnaa023

2019

Distribution and assessment of the conservation status of i Erioderma pedicellatum i in Asia
Distribution and assessment of the conservation status ofErioderma pedicellatumin Asia
Gulnara TAGIRDZHANOVA, Irina S. STEPANCHIKOVA, Dmitry E. HIMELBRANT, Marina P. VYATKINA, Aleksandra V. DYOMINA, Veronika G. DIRKSEN, Christoph SCHEIDEGGER
The Lichenologist  ·  01 Nov 2019  ·  doi:10.1017/S0024282919000380
New records of lichens and allied fungi from the Leningrad Region, Russia. X
New records of lichens and allied fungi from the Leningrad Region, Russia. X
Dmitry E. Himelbrant, Irina S. Stepanchikova, Jurga Motiejūnaitė, Ekaterina S. Kuznetsova, Gulnara Tagirdzhanova, Ivan V. Frolov
Folia Cryptogamica Estonica  ·  11 Jun 2019  ·  doi:10.12697/fce.2019.56.04

2016

Ninety-One Species of Lichens and Allied Fungi New to Latvia with a List of Additional Records from Kurzeme
Ninety-One Species of Lichens and Allied Fungi New to Latvia with a List of Additional Records from Kurzeme
Jurga Motiejūnaitė, Sergei V. Chesnokov, Paweł Czarnota, Ludmila V. Gagarina, Ivan Frolov, …, Irina Stepanchikova, Ave Suija, Gulnara Tagirdzhanova, Arne Thell, Andrei Tsurykau
Herzogia  ·  01 Jun 2016  ·  doi:10.13158/heia.29.1.2016.143

2015

New records of lichens and allied fungi from the Leningrad Region, Russia. VI
New records of lichens and allied fungi from the Leningrad Region, Russia. VI
Dmitry Himelbrant, Irina Stepanchikova, Jurga Motiejūnaitė, Jan Vondrak, Gulnara Tagirdzhanova, Ludmila Gagarina, Ekaterina Kuznetsova
Folia Cryptogamica Estonica  ·  19 Aug 2015  ·  doi:10.12697/fce.2015.52.03

2014

New records of lichens and allied fungi from the Leningrad Region, Russia. V
New records of lichens and allied fungi from the Leningrad Region, Russia. V
Dmitry E. Himelbrant, Jurga Motiejūnaitė, Irina S. Stepanchikova, Gulnara M. Tagirdzhanova
Folia Cryptogamica Estonica  ·  10 Jul 2014  ·  doi:10.12697/fce.2014.51.04
New lichen records from the Novgorod Region, Russia
New lichen records from the Novgorod Region, Russia
Gulnara M. Tagirdzhanova, Olga A. Kataeva, Irina S. Stepanhcikova
Folia Cryptogamica Estonica  ·  10 Jul 2014  ·  doi:10.12697/fce.2014.51.11